UsTK : Ultrasound ToolKit  version 2.0.1 under development (2024-11-21)
testUsImagePreScan2DXmlParser.cpp

USTK XML parser example.

This example contains the declaration of a class used to read and write data in a xml file like:

<?xml version="1.0"?>
<config>
<image_type>prescan</image_type>
<axial_resolution>0.0005</axial_resolution>
<scanline_pitch>0.0045</scanline_pitch>
<probe_radius>0.0547896</probe_radius>
<is_convex>1</is_convex>
<image_file_name>prescan2D.png</image_file_name>
</config>
/****************************************************************************
*
* This file is part of the ustk software.
* Copyright (C) 2016 - 2017 by Inria. All rights reserved.
*
* This software is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* ("GPL") version 2 as published by the Free Software Foundation.
* See the file LICENSE.txt at the root directory of this source
* distribution for additional information about the GNU GPL.
*
* For using ustk with software that can not be combined with the GNU
* GPL, please contact Inria about acquiring a ViSP Professional
* Edition License.
*
* This software was developed at:
* Inria Rennes - Bretagne Atlantique
* Campus Universitaire de Beaulieu
* 35042 Rennes Cedex
* France
*
* If you have questions regarding the use of this file, please contact
* Inria at ustk@inria.fr
*
* This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
* WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
*
* Author:
* Marc Pouliquen
*
*****************************************************************************/
#include <visp3/core/vpConfig.h>
#include <iostream>
#if defined(VISP_HAVE_XML2)
#include <visp3/core/vpDebug.h>
#include <visp3/core/vpIoTools.h>
#include <visp3/core/vpXmlParser.h>
#include <visp3/io/vpParseArgv.h>
#include <visp3/ustk_core/usImageIo.h>
#include <string>
/* -------------------------------------------------------------------------- */
/* COMMAND LINE OPTIONS */
/* -------------------------------------------------------------------------- */
// List of allowed command line options
#define GETOPTARGS "cdo:h"
void usage(const char *name, const char *badparam, const std::string &opath, const std::string &user);
bool getOptions(int argc, const char **argv, std::string &opath, const std::string &user);
void usage(const char *name, const char *badparam, const std::string &opath, const std::string &user)
{
fprintf(stdout, "\n\
Write and read data in a xml file.\n\
\n\
SYNOPSIS\n\
%s [-o <output image path>] [-h]\n",
name);
fprintf(stdout, "\n\
OPTIONS: Default\n\
-o <output data path> %s\n\
Set data output path.\n\
From this directory, creates the \"%s\"\n\
subdirectory depending on the username, where \n\
prescan2D.xml file is written.\n\
\n\
-h\n\
Print the help.\n\n",
opath.c_str(), user.c_str());
if (badparam) {
fprintf(stderr, "ERROR: \n");
fprintf(stderr, "\nBad parameter [%s]\n", badparam);
}
}
bool getOptions(int argc, const char **argv, std::string &opath, const std::string &user)
{
const char *optarg_;
int c;
while ((c = vpParseArgv::parse(argc, argv, GETOPTARGS, &optarg_)) > 1) {
switch (c) {
case 'o':
opath = optarg_;
break;
case 'h':
usage(argv[0], NULL, opath, user);
return false;
break;
case 'c':
case 'd':
break;
default:
usage(argv[0], optarg_, opath, user);
return false;
break;
}
}
if ((c == 1) || (c == -1)) {
// standalone param or error
usage(argv[0], NULL, opath, user);
std::cerr << "ERROR: " << std::endl;
std::cerr << " Bad argument " << optarg_ << std::endl << std::endl;
return false;
}
return true;
}
/* -------------------------------------------------------------------------- */
/* MAIN FUNCTION */
/* -------------------------------------------------------------------------- */
int main(int argc, const char **argv)
{
try {
std::string opt_opath;
std::string opath;
std::string filename;
std::string username;
std::cout << "-------------------------------------------------------" << std::endl;
std::cout << " testUSXmlParser.cpp" << std::endl << std::endl;
std::cout << " writing and reading ultrasound data using a the US xml parser" << std::endl;
std::cout << "-------------------------------------------------------" << std::endl;
std::cout << std::endl;
// Set the default output path
#if !defined(_WIN32) && (defined(__unix__) || defined(__unix) || (defined(__APPLE__) && defined(__MACH__))) // UNIX
opt_opath = "/tmp";
#elif defined(_WIN32)
opt_opath = "C:\\temp";
#endif
// Get the user login name
vpIoTools::getUserName(username);
// Read the command line options
if (getOptions(argc, argv, opt_opath, username) == false) {
exit(-1);
}
// Get the option values
if (!opt_opath.empty())
opath = opt_opath;
// Append to the output path string, the login name of the user
std::string dirname = vpIoTools::createFilePath(opath, username);
// Test if the output path exist. If no try to create it
if (vpIoTools::checkDirectory(dirname) == false) {
try {
// Create the dirname
vpIoTools::makeDirectory(dirname);
} catch (...) {
usage(argv[0], NULL, opath, username);
std::cerr << std::endl << "ERROR:" << std::endl;
std::cerr << " Cannot create " << dirname << std::endl;
std::cerr << " Check your -o " << opath << " option " << std::endl;
exit(-1);
}
}
filename = dirname + vpIoTools::path("/") + "prescan2D.xml";
// Init values in reference parser (same values in file read in test)
vpImage<unsigned char> data(320, 128, 128); // Set pixel intensity to 128
usImagePreScan2D<unsigned char> prescan2DReference;
prescan2DReference.setData(data);
prescan2DReference.setAxialResolution(0.0005);
prescan2DReference.setScanLinePitch(0.0045);
prescan2DReference.setTransducerRadius(0.05478);
prescan2DReference.setTransducerConvexity(true);
prescan2DReference.setTransmitFrequency(300000);
prescan2DReference.setSamplingFrequency(2000000);
usImageIo::write(prescan2DReference, filename);
std::cout << "Written in " << filename << std::endl;
std::cout << prescan2DReference;
// read the image we just wrote
filename = dirname + vpIoTools::path("/") + "prescan2D.xml";
usImageIo::read(prescan2D, filename);
std::cout << "Read from " << filename << std::endl;
std::cout << prescan2D;
if (prescan2D == prescan2DReference) {
std::cout << "Test passed !" << std::endl;
return 0;
}
// Clean up memory allocated by the xml library
vpXmlParser::cleanup();
std::cout << "Test failed !" << std::endl;
return 1;
} catch (const vpException &e) {
std::cout << "Catch an exception: " << e.getMessage() << std::endl;
return 1;
}
}
#else
int main()
{
std::cout << "Xml parser requires libxml2." << std::endl;
return 0;
}
#endif
static void read(usImageRF2D< short int > &imageRf2D, const std::string &headerFileName)
Definition: usImageIo.cpp:153
static void write(const usImageRF2D< short > &rfImage, const std::string &headerFileName, const std::string &imageExtension2D)
Definition: usImageIo.cpp:104
void setData(const vpImage< Type > image)
void setAxialResolution(const double axialResolution)
void setTransducerConvexity(const bool isTransducerConvex)
void setScanLinePitch(const double scanLinePitch)
void setTransmitFrequency(const int transmitFrequency)
void setSamplingFrequency(const int samplingFrequency)
void setTransducerRadius(const double transducerRadius)